HyperAIHyperAI

Command Palette

Search for a command to run...

5 months ago

Dense Steerable Filter CNNs for Exploiting Rotational Symmetry in Histology Images

Simon Graham; David Epstein; Nasir Rajpoot

Dense Steerable Filter CNNs for Exploiting Rotational Symmetry in Histology Images

Abstract

Histology images are inherently symmetric under rotation, where each orientation is equally as likely to appear. However, this rotational symmetry is not widely utilised as prior knowledge in modern Convolutional Neural Networks (CNNs), resulting in data hungry models that learn independent features at each orientation. Allowing CNNs to be rotation-equivariant removes the necessity to learn this set of transformations from the data and instead frees up model capacity, allowing more discriminative features to be learned. This reduction in the number of required parameters also reduces the risk of overfitting. In this paper, we propose Dense Steerable Filter CNNs (DSF-CNNs) that use group convolutions with multiple rotated copies of each filter in a densely connected framework. Each filter is defined as a linear combination of steerable basis filters, enabling exact rotation and decreasing the number of trainable parameters compared to standard filters. We also provide the first in-depth comparison of different rotation-equivariant CNNs for histology image analysis and demonstrate the advantage of encoding rotational symmetry into modern architectures. We show that DSF-CNNs achieve state-of-the-art performance, with significantly fewer parameters, when applied to three different tasks in the area of computational pathology: breast tumour classification, colon gland segmentation and multi-tissue nuclear segmentation.

Code Repositories

ladislasl/CNN_invar_rot
pytorch
Mentioned in GitHub
simongraham/dsf-cnn
Official
tf
Mentioned in GitHub

Benchmarks

BenchmarkMethodologyMetrics
breast-tumour-classification-on-pcamDSF-CNN (C8)
AUC: 0.975
colorectal-gland-segmentation-on-cragDSF-CNN (C8)
Dice: 0.891
F1-score: 0.874
Hausdorff Distance (mm): 138.4
multi-tissue-nucleus-segmentation-on-kumarDSF-CNN (C8)
Dice: 0.826
Hausdorff Distance (mm): 60

Build AI with AI

From idea to launch — accelerate your AI development with free AI co-coding, out-of-the-box environment and best price of GPUs.

AI Co-coding
Ready-to-use GPUs
Best Pricing
Get Started

Hyper Newsletters

Subscribe to our latest updates
We will deliver the latest updates of the week to your inbox at nine o'clock every Monday morning
Powered by MailChimp
Dense Steerable Filter CNNs for Exploiting Rotational Symmetry in Histology Images | Papers | HyperAI