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5 months ago

Real-time Automatic M-mode Echocardiography Measurement with Panel Attention from Local-to-Global Pixels

Ching-Hsun Tseng; Shao-Ju Chien; Po-Shen Wang; Shin-Jye Lee; Wei-Huan Hu; Bin Pu; Xiao-jun Zeng

Real-time Automatic M-mode Echocardiography Measurement with Panel Attention from Local-to-Global Pixels

Abstract

Motion mode (M-mode) recording is an essential part of echocardiography to measure cardiac dimension and function. However, the current diagnosis cannot build an automatic scheme, as there are three fundamental obstructs: Firstly, there is no open dataset available to build the automation for ensuring constant results and bridging M-mode echocardiography with real-time instance segmentation (RIS); Secondly, the examination is involving the time-consuming manual labelling upon M-mode echocardiograms; Thirdly, as objects in echocardiograms occupy a significant portion of pixels, the limited receptive field in existing backbones (e.g., ResNet) composed from multiple convolution layers are inefficient to cover the period of a valve movement. Existing non-local attentions (NL) compromise being unable real-time with a high computation overhead or losing information from a simplified version of the non-local block. Therefore, we proposed RAMEM, a real-time automatic M-mode echocardiography measurement scheme, contributes three aspects to answer the problems: 1) provide MEIS, a dataset of M-mode echocardiograms for instance segmentation, to enable consistent results and support the development of an automatic scheme; 2) propose panel attention, local-to-global efficient attention by pixel-unshuffling, embedding with updated UPANets V2 in a RIS scheme toward big object detection with global receptive field; 3) develop and implement AMEM, an efficient algorithm of automatic M-mode echocardiography measurement enabling fast and accurate automatic labelling among diagnosis. The experimental results show that RAMEM surpasses existing RIS backbones (with non-local attention) in PASCAL 2012 SBD and human performances in real-time MEIS tested. The code of MEIS and dataset are available at https://github.com/hanktseng131415go/RAME.

Code Repositories

hanktseng131415go/ramem
Official
pytorch
Mentioned in GitHub

Benchmarks

BenchmarkMethodologyMetrics
real-time-instance-segmentation-on-meismaYOLACT ResNet50
FLOPs (G): 0.4826
Frame (fps): 36.13
Size (M): 30.38
avgAP (mask AP + box AP): 46.29
boxAP: 49.59
maskAP: 42.99
real-time-instance-segmentation-on-meisRAMEM UPANet80 V2
FLOPs (G): 100.85
Frame (fps): 52.22
Size (M): 40.28
avgAP (mask AP + box AP): 47.15
boxAP: 51.2
maskAP: 43.09
real-time-instance-segmentation-on-pascal-vocmaYOLACT ResNet50
FLOPs (G): 48.26
Frame (fps): 81.27
Size (M): 30.41
avgAP (mask AP + box AP): 37.39
boxAP: 37.50
maskAP: 37.27
real-time-instance-segmentation-on-pascal-vocRAMEM UPANet80 V2
FLOPs (G): 100.85
Frame (fps): 60.93
Size (M): 40.32
avgAP (mask AP + box AP): 42.69
boxAP: 42.96
maskAP: 42.42
real-time-instance-segmentation-on-pascal-vocYOLACT ResNet50
FLOPs (G): 48.26
Frame (fps): 81.11
Size (M): 30.41
avgAP (mask AP + box AP): 35.73
boxAP: 36.65
maskAP: 35.12

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Real-time Automatic M-mode Echocardiography Measurement with Panel Attention from Local-to-Global Pixels | Papers | HyperAI