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3 months ago

Graph Representation Learning Beyond Node and Homophily

You Li Bei Lin Binli Luo Ning Gui

Graph Representation Learning Beyond Node and Homophily

Abstract

Unsupervised graph representation learning aims to distill various graph information into a downstream task-agnostic dense vector embedding. However, existing graph representation learning approaches are designed mainly under the node homophily assumption: connected nodes tend to have similar labels and optimize performance on node-centric downstream tasks. Their design is apparently against the task-agnostic principle and generally suffers poor performance in tasks, e.g., edge classification, that demands feature signals beyond the node-view and homophily assumption. To condense different feature signals into the embeddings, this paper proposes PairE, a novel unsupervised graph embedding method using two paired nodes as the basic unit of embedding to retain the high-frequency signals between nodes to support node-related and edge-related tasks. Accordingly, a multi-self-supervised autoencoder is designed to fulfill two pretext tasks: one retains the high-frequency signal better, and another enhances the representation of commonality. Our extensive experiments on a diversity of benchmark datasets clearly show that PairE outperforms the unsupervised state-of-the-art baselines, with up to 101.1\% relative improvement on the edge classification tasks that rely on both the high and low-frequency signals in the pair and up to 82.5\% relative performance gain on the node classification tasks.

Benchmarks

BenchmarkMethodologyMetrics
node-classification-on-citeseerPairE
Accuracy: 75.53
node-classification-on-cora-fixed-20-node-perPairE
Micro F1: 75.12
node-classification-on-dblpPairE
Micro F1: 80.58
node-classification-on-deezer-romaniaPairE
Micro-F1: 0.68
node-classification-on-ppiPairE
Micro F1: 94.83
node-classification-on-pubmedPairE
F1: 88.57

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Graph Representation Learning Beyond Node and Homophily | Papers | HyperAI